Sitemap - 2013 - Rabbit Thoughts
Video Tutorial on Python & mahotas for image processing (I)
How to save & load large pandas dataframes
I'm Doubling Down on a Mistake
Python "lists" are not lists. A history
How to Check for Errors in Bash Process Substitution
Paper-Based Secret Santa Protocol
FAQ: How Many Clusters Did You Use?
Unsupervised subcellular pattern unmixing. Part II
Old Work: Unsupervised Subcellular Pattern Unmixing
Notes from an Applied Rationality Workshop
Old papers: Structured Literature Image Finder (SLIF)
Updated Photo & Traveling to NYC (Self Centered Post)
Why Python is Better than Matlab for Scientific Software
The False Hope of Usable Data Analysis
Mahotas and the Python Scientific Ecosystem for Bioimage Analysis
Seeing is Believing. Which is Dangerous.
Why Science is a Third World Economy
Is Cell Segmentation Needed for Cell Analysis?
Removing a string prefix in Python
To reproduce the paper, you cannot use the code we used for the paper
Mahotas-imread Now Accepts Options When Writing
Predatory Authors & Predatory Publishers
Why Pixel Counting is not Adequate for Evaluating Segmentation
Nuclear Segmentation in Microscope Cell Images
The "Label it twice" Principle
Merging directories without loss of data
Working Around Bugs in Third Party Libraries
How to run a practical tutorial with Amazon WebServices
Making my website look not-ugly on a wide screen
Extended Depth of Field In Python using Mahotas
Jug now outputs metadata on the computation
Mahotas: A continuous improvement example
Mahotas software paper published
The Hard Part is Motivation. Books. &c
Building Machine Learning Systems with Python: Willi Richert, Luis Pedro Coelho
Using imread to save disk space
Bioimage Analysis Proceedings Session at #ISBMECCB (Live Blogging)
Notes on #ISMBECCB Sunday Afternoon Sessions
Notes on #ISMBECCB Highlights Session (Sunday Morning)
Recognition of an Organelle Marker is not the Same as Recognition of the Organelle
The Subcellular Location Determination Problem
Making Your Mistakes in Public
Motivation. Portugal. Excellence
Paper Review: FuncISH: learning a functional representation of neural ISH images
Use Grep in the C Locale When Working with ASCII Files
Putting My Effort Where My Mouth Is
Computer Programming as Liberal Arts
Universities Merging: Improved Rank
What is a Gene? The Definitive Answer
Paper Review: Dual Host-Virus Arms Races Shape an Essential Housekeeping Protein
How Long Does PLoS Take to Review a Paper? All PLoS Journals Now
How Long Does Plos One Take to Accept A Paper?
Building Machine Learning Systems with Python
Parameter Optimization and Early Exit
Paper Review: Distributed 3D image segmentation using micro-labor workforce
People Agreeing With Me on the Internet
Segmenting Images In Parallel With Python & Jug
Introduction to Jug: Parallel Tasks in Python
Fantastic Word That English Does not Have (Neither Does Portuguese, it Seems)
A few interesting statistical facts
Why I develop open-source scientific software?